rs32509396 SNP Detail

Summary

• ID
  rs32509396
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:149131020 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGAA ACTCCACTCC AGTGCCCCAT
  Y
  GCTCCCACAC TGCTCACAAG ATTAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45656273	mCV22999349	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T	C
ss148026157	ENSMUSSNP710096	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		C
ss321424457	CHEV_4_148420672	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32509396					SNP	C	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149131020 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Pex14	peroxisomal biogenesis factor 14			Intron
				Noncoding-Transcript-Variant
Rr604817	regulatory region 604817			266 bp distal
Rr604818	regulatory region 604818			768 bp proximal
Rr604819	regulatory region 604819			1035 bp proximal