rs32507390 SNP Detail

Summary

• ID
  rs32507390
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:143004850 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTAC AACGGCACCG GCAGAAACAG
  Y
  ACTGTGCTCT TGAACTTTCC CACCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45656157	mCV23739312	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	C
ss147778529	ENSMUSSNP2504869	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
ss321403676	CHEV_4_142868183	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32507390					SNP	C	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:143004850 () rs orientation: forward

Symbol	Name	Function Class
Pdpn	podoplanin	Intron
Rr604183	regulatory region 604183	2 bp proximal
Rr604184	regulatory region 604184	1213 bp proximal
Tssr44446	transcription start site region 44446	618 bp downstream