rs32506196 SNP Detail

Summary

• ID
  rs32506196
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149409715 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCATCCTG CATTCTGAAC
  TATTTATGTA TGTGTGTACA CTGTCGTTAT CTTGAGACAC CAGAAGAGGG CATCAGATCT
  CATTACAGAT GGTTGTGAGC CACCATGTGG TTGCTGGGAT TTGAACTCAG GACCTTTGGA
  AGAGCAGTCA GTGCTCTTAA CCGCTGAGCC ATCTCTGCAG CCCCTGACTA TTCTGAATAT
  W
  GACTATTCTG AACGATCTTG CCATGCAGCA GGAATGGTGG TAACACAAGG CGAAGCCAGA
  AGCCCTAGAT TCATGGCTCA GTTTCACTAC ACCGTCTCCT AACTCTGGCT GTTGAGGATT
  AAACGAGTTA TGACTACACG TAAGAGTGAT CGCACCCTGA ACATATTCAA GAAATGGGAA
  TCACTAACCA TCTGTCCCAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45656333	mCV24954200	ABI	CRAMUS_MOUSE	f	SNP	A	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32506196					SNP	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149409715 () rs orientation: forward

Symbol	Name	Function Class
Rr604885	regulatory region 604885	983 bp distal
Rr604886	regulatory region 604886	553 bp distal
Rr604887	regulatory region 604887	357 bp distal
Rr604888	regulatory region 604888	124 bp distal
Rr604889	regulatory region 604889	374 bp proximal
Rr604890	regulatory region 604890	374 bp proximal
Rr604891	regulatory region 604891	1969 bp proximal
Tssr40322	transcription start site region 40322	1281 bp downstream
Tssr40323	transcription start site region 40323	1266 bp downstream