rs32503652 SNP Detail

Summary

• ID
  rs32503652
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:55363934 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGAATACG TGCCAGTGGG
  GAAAAGTACA GTAAATAAAT GTTCTCATAA GAAGTAAGTA GTAACTTAAT GTAGGGATAG
  GTCACAGCTG TTAAAGAGCT TGTAGACTGA AAAATTGGGA CCTACGCTTA GGTTTTATAT
  CACGGGGAAG GTATATTAAA TTGGCTAATG ACTTGTAATT TATGAGTTTA TTGATGCTGA
  R
  ATTATTGCCT GAGATTTTTT TCTTTTAATG GTGGATTTTA GAACAGAGTT TTGTGATTTT
  GGGTTACATC AGAATAGCAT TTAAGGAAGT GAATGTGACA CTGGCAACTG AGAGTGTTTC
  TAAAATGCAC TAAAGCTTGG AGTCTTGGGG AACCGCTTTG GGTTCCAGCT AACTGAGAGT
  AAGTAGTGTG TCGTCCACCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45656398	mCV24912359	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss146358186	ENSMUSSNP2632136	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32503652					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:55363934 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rad23b	RAD23 homolog B, nucleotide excision repair protein			Intron
				Noncoding-Transcript-Variant
Rr592471	regulatory region 592471			445 bp proximal
Rr592472	regulatory region 592472			646 bp proximal