rs32503566 SNP Detail

Summary

• ID
  rs32503566
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150651901 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCATGGGC ACCGTCCTGC
  AGGGTTAAGC GTTACTTTTT TTTTTTTTTT TTTTGGTTTG GTTAGTTTTC TTTTTGTTTT
  TTTCAGAGAT GGGGGTCTCT CTGTGTAGCC CTGGCTGCCC TGGAACTCAC TCTGTAGACC
  AGGCTGGCCT CAAACTCAGA AATCCGCCTG CCTCTGCCTC CCGAGTGCTG GGATCAAAAG
  Y
  GTGCGCCAGC AACGCCCTGC AAGTGTTACT CTCAGAAGAG CTGGGAAAGA TAATGGGAGC
  TGATGGGGAA AGCCATAGGT TTGTGTTGTT TCGTGCTGTT CTCAAATCTG CTTTTAGCTG
  AGGCTGCCCT TGAGCTTCAG CTCCCACTGC TTCTGCCTTC CTAGGCTAGG GCTGCAGTGT
  GCTTAAAATC TGGAGGCTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45656206	mCV23182742	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss148054985	ENSMUSSNP2819097	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs32503566					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150651901 () rs orientation: forward

Symbol	Name	Function Class
Gm13091	predicted gene 13091	within coordinates
Rere	arginine glutamic acid dipeptide (RE) repeats	Intron
Rr398883	regulatory region 398883	962 bp downstream
Rr605335	regulatory region 605335	809 bp distal
Rr605336	regulatory region 605336	750 bp proximal
Rr605337	regulatory region 605337	1090 bp proximal
Tssr40415	transcription start site region 40415	950 bp downstream
Tssr40416	transcription start site region 40416	860 bp downstream
Tssr40417	transcription start site region 40417	1372 bp upstream
Tssr40418	transcription start site region 40418	1773 bp upstream
Tssr40419	transcription start site region 40419	1805 bp upstream
Tssr44743	transcription start site region 44743	568 bp upstream
Tssr44744	transcription start site region 44744	1256 bp downstream