rs32497677 SNP Detail

Summary

• ID
  rs32497677
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:63291889 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGGT AGGCACTGCT ATTTCTATGT
  M
  GTCTGCTGTC ACTTTATCTC CTCAG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45655552	mCV24480217	ABI	CRAMUS_MOUSE	f	SNP	C	A	A
ss146443083	ENSMUSSNP146188	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32497677					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:63291889 () rs orientation: forward

Symbol	Name	Function Class
Akna	AT-hook transcription factor	Intron
Gm69532	predicted gene, 69532	45 bp upstream
Rr593533	regulatory region 593533	1558 bp distal
Rr593534	regulatory region 593534	within coordinates
Rr593535	regulatory region 593535	822 bp proximal