rs32490135 SNP Detail

Summary

• ID
  rs32490135
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:141303543 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCCACCCC AGACAAAAAC
  AAGACACAAG GAAAGAACAT ATGTTTATTT TTTTCTGTGT GCAACTTAGA AGTTACAAAG
  CACAAAAATG ATTTTTTTTC TACTTTACAT TTTATCTCTA TTAGATGTGT GTGCACAAAC
  GTGTATCTTG GTATGCAGGT GTAAACCAGA GGACAACTTA TAGAATTGGC TCTCTCCTTC
  M
  CTGTGGGTCC CAGAGACAGG ACTCCGGCCA TCAGACTTGG AAGCCAGCAC CTCTACCAGC
  TGAATCATCT TGCCTGCCTT AAAGTGAATT TCCTTAAGAG GGAGAATGTT CTAGGTGTGG
  CTTCACAGAG ACAGTGGTTA CGGGCAGCCT AGCAGCAAAG CTGAAGTGGA GGCTGGGTGG
  CACACATGGG AGACCAAAGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45654640	mCV22793480	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	A
ss321388168	CHEV_4_141132147	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs32490135					SNP	C	C	A	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141303543 () rs orientation: forward

Symbol	Name	Function Class
Fblim1	filamin binding LIM protein 1	mRNA-UTR
Gm68503	predicted gene, 68503	1058 bp upstream
Rr603812	regulatory region 603812	1069 bp distal
Rr603813	regulatory region 603813	568 bp distal
Rr603814	regulatory region 603814	639 bp distal
Rr603815	regulatory region 603815	827 bp proximal
Tssr44332	transcription start site region 44332	573 bp downstream