rs32489507 SNP Detail

Summary

• ID
  rs32489507
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:5508510 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAAGAAGG TAGATTGTTA
  CCTCTCTTTC TGTTTGGTCT AACTTGCCTT GCTGCTCAGC CCTCCAGGCG TGGTGGAGTC
  AGTGGCCAGC TTGGAGAGGC TCCATGCTTC TGTCTCCTGG TCTAAGGGTC CACCTGGGCT
  ATGAGCAGCA GCATCTGGCC TGACTCCTTT AATGATACAG AAGGACAGTC CTTAGCATGA
  Y
  TATAGGAGGC AAAAAATTAG AATCCATGTA TTATCCTACT CTCCTCACTT GCAAAAGAGG
  GCAGAGAGAG CTAGCAGGAA GCATGGATGT GCTAACCCTC AGTTTGAATA GAAACCTCTG
  CCTCACTTGC CTGGGGTTCA TAAGTTCTAC TTAGAAAAAA AAAAGTAAAT GTTAAAAAAA
  ACTTTTACAT TAGTCTTTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321729352	CHEV_6_5458510	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs32489507					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:5508510 () rs orientation: forward

Symbol	Name	Function Class
Rr406959	regulatory region 406959	within coordinates
Rr626154	regulatory region 626154	300 bp distal
Rr626155	regulatory region 626155	722 bp proximal