rs32489506 SNP Detail

Summary

• ID
  rs32489506
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:5508480 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTCCTTCC CCATACCACT
  GGGTCTGCTT CACAAGAAGG TAGATTGTTA CCTCTCTTTC TGTTTGGTCT AACTTGCCTT
  GCTGCTCAGC CCTCCAGGCG TGGTGGAGTC AGTGGCCAGC TTGGAGAGGC TCCATGCTTC
  TGTCTCCTGG TCTAAGGGTC CACCTGGGCT ATGAGCAGCA GCATCTGGCC TGACTCCTTT
  M
  ATGATACAGA AGGACAGTCC TTAGCATGAC TATAGGAGGC AAAAAATTAG AATCCATGTA
  TTATCCTACT CTCCTCACTT GCAAAAGAGG GCAGAGAGAG CTAGCAGGAA GCATGGATGT
  GCTAACCCTC AGTTTGAATA GAAACCTCTG CCTCACTTGC CTGGGGTTCA TAAGTTCTAC
  TTAGAAAAAA AAAAGTAAAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321729351	CHEV_6_5458480	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs32489506					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:5508480 () rs orientation: forward

Symbol	Name	Function Class
Rr406959	regulatory region 406959	within coordinates
Rr626154	regulatory region 626154	270 bp distal
Rr626155	regulatory region 626155	752 bp proximal