rs32488748 SNP Detail

Summary

• ID
  rs32488748
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:5507940 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCCCAAGGA GCTGGTGTCC
  TGCTCTGCTC TCCATTTTCA CTTGGACCCA GTGTCTTCTG AGAGCTGCTG CTGGGGTACG
  GCAAGCTGAA ATTCCACAAC CTTCCAAGGC TTCTGCCTTT CCTCTGCTTA CTGACCATTG
  CCTACGTTTC CTAAGATCAT CACCAAACAA GGTATTCTTC TGTGTAGTCC TGGCACTCAC
  R
  GAATCCATGT AGAAGTCTCT TACTTAGAAA ACTCCAGTGC TTGTCCTAGC CTGCCCTTGG
  TTCATGTGCT GTGACAGCCT TTGGTAACCT TTCTGACTTT CCACACAGTC AAGCACTCAC
  AGCCAAGTCC TGGGTCATCT GGAAGACACG CATATTCTCT AGAGGAAATC GTTTTGTGGC
  TGTTTTTATT TTCTCTAACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321729344	CHEV_6_5457940	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs32488748					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:5507940 () rs orientation: forward

Symbol	Name	Function Class
Rr406959	regulatory region 406959	51 bp proximal
Rr626154	regulatory region 626154	within coordinates
Rr626155	regulatory region 626155	1292 bp proximal