rs32488745 SNP Detail

Summary

• ID
  rs32488745
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:5507744 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTTAAGTA GTTTTTAAAA
  ATAATTAATC AGAATAAATA AATAAATAAA TAAATAAGCA AGGTACATTC TCTTAAGAAG
  GTTTGAAAAA ATTAATCAGA ATAAATAAAC AAACAAACAA ATAAATAAGG TAATAGAAAT
  GGGCTAGCAT CTCTCTTGTC TTCTTTTCAA TCCCCTTGCC ATGAAGCACG AGCTAGGTCC
  Y
  AAGGAGCTGG TGTCCTGCTC TGCTCTCCAT TTTCACTTGG ACCCAGTGTC TTCTGAGAGC
  TGCTGCTGGG GTACGGCAAG CTGAAATTCC ACAACCTTCC AAGGCTTCTG CCTTTCCTCT
  GCTTACTGAC CATTGCCTAC GTTTCCTAAG ATCATCACCA AACAAGGTAT TCTTCTGTGT
  AGTCCTGGCA CTCACGGAAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321729341	CHEV_6_5457744	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs32488745					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:5507744 () rs orientation: forward

Symbol	Name	Function Class
Rr406959	regulatory region 406959	247 bp proximal
Rr626154	regulatory region 626154	158 bp proximal
Rr626155	regulatory region 626155	1488 bp proximal