rs32488415 SNP Detail

Summary

• ID
  rs32488415
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:11013613 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGACCAATTC TTCCCAAACT CTTTCCTTCA GTGTGCCTTC CACCACTTCA CTTCACATTG
  AGAACATAGA GTCTGCTCAC TAGCAGGATA AATGCCAGAG AGGCATGCCT GCCATGGACC
  AGCCTAGAGA GGGGTTCTGA GAGAAGGGGT ATCGGGGAGT GGTAAAAAGA ACAACTGGAA
  AGAAAGACAT GGACAGATTT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTGTGTGTGT
  GTGTGTCCAT GTCCTGCTCG CTTTTGTATG TGTATGTGTT CTCTCTCTCT CTTTTTTTTT
  W
  AAGATTTATT CATTTATTAT AATTAAGTCC ACTGTAGCTG TCTCAGACAC ACCAGAAGAG
  AGCATCAGAT CCCATTACAG ATGGTTGTGA GCCACCATGT GGTTGCTGGG AACTGAACTC
  AGGACCTCTG GAAGAGCAGT CAGTGCTCTT AACCCTGAAC CATCTCTCCA GCCAAAAAAA
  GAGTTCTCTC TTTTTGTCCT AAAAAATTAT CTGAATAGCT TGTCTCCTAC AGAACACAGG
  TCCAGTCTTT TATTTTACAC AATCCAGTCA TTTACTCCAG GTTTCCTTTA GATTATCTTA
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45654447	mCV23237967	ABI	CRAMUS_MOUSE	f	SNP	A	T	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs32488415					SNP	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:11013613 () rs orientation: forward

Symbol	Name	Function Class
Gm46843	predicted gene, 46843	within coordinates
Rr376093	regulatory region 376093	within coordinates
Rr588850	regulatory region 588850	623 bp proximal
Rr588851	regulatory region 588851	1070 bp proximal
Rr588852	regulatory region 588852	1747 bp proximal