rs32488002 SNP Detail

Summary

• ID
  rs32488002
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:5507379 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGGCAAAT CAATATTTTA
  ATTTCCTCAG TAAAGTTAAC CTTACATTTC TATTAAGTAT TTTTGGCTTC TTCTGAGTGC
  TGCCTTATCT TCCCATATGG GACAAAGTGT CATGGAATCA TAAGAAATAT TTCCAAAAAC
  CCACGTGATT GATATTTTGA AAACTTAAGC ACAGATGTAC TCACTATGAA GACTGCCAGG
  W
  TGTCCATAGT GCTTAGATGT TGGTGGTGTT TATCTTTGCT CCGTAAATGC GTCTCTGATG
  TTAAACAATG AAATGATAGT TTTTAATTGT AAGCAAGTAA ATATTTCAAA AGTTAAAATG
  GTGATATATG GAGCAAGAGA ACTGAAGAAT TTGGCAAATA CATTCTCTTA AGTAGTTTTT
  AAAAATAATT AATCAGAATA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321729337	CHEV_6_5457379	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs32488002					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:5507379 () rs orientation: forward

Symbol	Name	Function Class
Rr406959	regulatory region 406959	612 bp proximal
Rr626154	regulatory region 626154	523 bp proximal
Rr626155	regulatory region 626155	1853 bp proximal