rs32487626 SNP Detail

Summary

• ID
  rs32487626
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:99194621 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCCAACCC CGTTTCTTTT
  TGATGATGGC TGCCTCTCTT TGAGAAATAT GCCTCTTAGC CTTCATTTTC TTACAGTTCC
  TTTGGTGAAT AAGTCAGTCC AGGCCTACCT AGGATCACCT GGTTGTCTCA GAATCTCAGG
  ATTGGGATTA AAAAAAATGA GGCTAAGAAA TGTCATCTGT GCCATCCTTC TTTCTGGGAG
  R
  CAGCTTTATG GGGTCGGACT GCTTGGATTC CAAACCTGCC TCCGCCGTTT AATCTCTGAG
  AACTGTAGCC ACGAAGTAAC CTGTTAGAAC CCCAGCTTCT CCATGAAATG GGGATACTTT
  CTCAGAAGGT TGTGAGGATT AAATGGACAT GTGGTGTGAC TCTGGCTCAT AATATGCACC
  CAGCAAACAT TACTGTTAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39409076	mCV25040767	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss148465289	ENSMUSSNP2764862	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss325080397	CHEV_15_99127171	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32487626					SNP	G	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:99194621 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Fam186b	family with sequence similarity 186, member B			mRNA-UTR
Prpf40b	pre-mRNA processing factor 40B			Intron
				Noncoding-Transcript-Variant
Rr509388	regulatory region 509388			1459 bp distal
Rr509389	regulatory region 509389			835 bp distal
Rr509390	regulatory region 509390			652 bp distal
Rr509391	regulatory region 509391			183 bp distal
Tssr133010	transcription start site region 133010			1461 bp downstream