rs32477382 SNP Detail

Summary

• ID
  rs32477382
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150270776 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATAAGGTGC CTTCTGACTT
  CTGTCTGTGA CTGGAGAGGG CTGGCTACTT TTCCAGAGGA CCCAGGTTCA GTTCCCAGCA
  ACCACATGGC AGCTCACAGC CTTCTGTAAC TCCAGTTCTG AGGGATCTGG CATCCTCACA
  GAGATGGAGG CAAAAACCAA TGTACATAAA AAAAAATAAA TCTTAAAAGA AAGGAAGGAA
  R
  GAAGAAAAGA AAGAAAAACA CTTTCCTCTG CAAGTTCCAT TCCCTCATCT ATGACCCTCA
  GAATAGGGCA AAGAGGGTTA TTCCAAGTGT CACAGAGGCT GGAGGGATGG CTCAATGGTT
  AGGGTCGTGT GTTGATCTTG CAGAGGACAT AGTTCAATTC CTAGCACCCA CAAAGACTCC
  AGTCCCAGGG ACTTTACTGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45653131	mCV24222042	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	G
ss148049590	ENSMUSSNP6472945	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32477382					SNP	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150270776 () rs orientation: forward

Symbol	Name	Function Class
Car6	carbonic anhydrase 6	696 bp downstream
Rr605217	regulatory region 605217	194 bp proximal
Rr605218	regulatory region 605218	401 bp proximal
Tssr40380	transcription start site region 40380	1097 bp upstream
Tssr40381	transcription start site region 40381	1106 bp upstream
Tssr40382	transcription start site region 40382	1124 bp upstream
Tssr40383	transcription start site region 40383	1138 bp upstream
Tssr44720	transcription start site region 44720	1071 bp downstream