rs32476056 SNP Detail

Summary

• ID
  rs32476056
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:149299745 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCCCAAAC TCAACTGGCT
  TCTGGGCCTT TTAAGGTCAC CTCTGAATTC TGATCTCTTG AATTGCTTCC AGGTGTGTTT
  TCAATACATA ATCAATACAA AAGCTAGTGC AAAAAGCATG GCAGAGCAGC TGACAAAGAC
  CAAATCACTC TACAAAAAGC TGCCCCACTG GAAGAAGAGT GACGAGTAAA GTGAAGGCTC
  R
  CGTGCTGTGG GCACCGCCCA GGACAGGGGA GCCCACTGAA GAGCTTACTC TTCAGAAGTG
  AAGATGCGCC AAGAGATCTG GCGCACACAC AACAGAAACC AGGAGGTGAG GGCAGGGAAG
  TGTGAGTGAA GTGGTTACTA GCACTAAAAT GGACTTTACA TCCCAGCACT ATGAGTCTTG
  TTTGACTTAA AGGACTATTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45652560	mCV23443310	ABI	CRAMUS_MOUSE	f	SNP		A	G					G	G
ss46701201	NES10943116	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	A	G		G	G	G	G	G	G	G
ss148029619	ENSMUSSNP6633285	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G						G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32476056					SNP	A	A	G	G	G	A	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46701201	NES10943116	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149299745 () rs orientation: forward

Symbol	Name	Function Class
Kif1b	kinesin family member 1B	Intron
Rr604862	regulatory region 604862	within coordinates
Rr604863	regulatory region 604863	783 bp proximal
Tssr44639	transcription start site region 44639	1092 bp upstream