rs32474966 SNP Detail

Summary

• ID
  rs32474966
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150692332 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATTCTGTT CCCTCTTCTG
  GCCTTGGACA TCCCCATACC ATACACAGCA GGAATTTAAA AACTGAAGCC TTTGAGCACA
  TTTTTGTTCT TTTGGATAAA CAAGCAAGGC ATAAAGTCTG TGGTCCTTGT TTAAGCAGGT
  AAAATCTGCA GGCGGTTTTT ACAAAGTAGC CTTGACTGCC TGTGTTCCCA CCAGCAACTT
  M
  TAGTTGTGTA GGCCTTCTGC ATTTTAAATT TATATTCTTT AATTTCCTCA GCCAGGGTTT
  CCACCTGGAC TAGGTGGCTG GTCATCGTGA CCCATGGTGC CCAGGTTTAT TAATCTGCTC
  TGGGCGCTTT ATTCTTCCAT TACCGCTGTT GTAACTTGTT GAGGAAGCTT GCTGTGGCCT
  GCACTATTAC ACTTACCTTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45652987	mCV23452772	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	A
ss148055277	ENSMUSSNP2325783	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32474966					SNP	C	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150692332 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rere	arginine glutamic acid dipeptide (RE) repeats			Intron
				Noncoding-Transcript-Variant
Rr605351	regulatory region 605351			530 bp distal