rs32471257 SNP Detail

Summary

• ID
  rs32471257
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136036924 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCCTGGAGC TAAACTGGCA
  GCAAGCTACA GCAATTCTCC GGTTGCAGTC TACATCAGCA CTGGAGTTTA CAGGTGCATG
  CGGTCACGCC AGGCTTTTTA CTCAAGTGGA TGGAGATTCA CAGTCAGGTT TTTTTTTTGT
  GGGGGGGCGG GGTTTCGAGA CAGGGTTTCT CTGTATAGCC CTGGCTGTCC TGGAACTCAC
  K
  CTGTAGACCA GGCTGGCCTG GAACTCAGAA ATCCGCCTGA CTGCCTCCCG AGTGCTGGGA
  TTAAAGGCAT GCGCCACCAC TGCCGGGCCA CAGTCAGGAT TTTAAACTTG CATTTGAGCC
  GTCTCTCCAG CCCCTAGGAC AGGCTTTACA ATTTACAGTT CTGGAAGCAG GGAAGTCCAA
  CATTGAGAGC ACGCGGGGAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45651651	mCV22562764	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	T
ss147565108	ENSMUSSNP2573905	ENSEMBL	ENSEMBL_Sanger	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs32471257					SNP	G	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136036924 () rs orientation: forward

Symbol	Name	Function Class
Gm13013	predicted gene 13013	1727 bp upstream
Hnrnpr	heterogeneous nuclear ribonucleoprotein R	1329 bp upstream
Rr367756	regulatory region 367756	within coordinates
Rr602347	regulatory region 602347	839 bp proximal
Rr602348	regulatory region 602348	1423 bp proximal
Tssr39700	transcription start site region 39700	1323 bp upstream
Tssr39701	transcription start site region 39701	1339 bp upstream
Tssr39702	transcription start site region 39702	1378 bp upstream