rs32466807 SNP Detail

Summary

• ID
  rs32466807
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:105735853 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAAAAGTA TCTTTAAAAA
  AAAAAAGCAT CCGGGTTTGG CTCCTGGAAA AAGGAACATG GAACCACTCC AGGATGATCA
  CTAATCTGCT TCAGGAAGGC AGCCTTCCCA CCTCGGGGGA CATTCACAAT GGTCTGCTGT
  AGTGATCTGT CATAGCATAT GGAGGGGGGG GGAGTGGAAC ATGAGATTGC ACAACAGAGG
  R
  ATATGCATAA TTTGGAACTG TGGTTTAAGA AAAAAGGAAA AGAAGGAAGG GAGGATCCCA
  TATTGTCTGT CTACATAGCC AAGAAGAGGC CAAGTGATAA ATTCTATGCC CATCTTGAGG
  GCATAGACTG GGAAACTAGT GGAGAGAGTA AATCACTGGT TTTGGAAATG TACCAAGTTA
  AATATCCTTT CTGCGTTATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49357223	NES12549795	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G		A	A	A	A
ss146766033	ENSMUSSNP4870692	ENSEMBL	ENSEMBL_Sanger	f	SNP		A										G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32466807					SNP	A	A	A	A	A	A	G	A	A	A	G	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49357223	NES12549795	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:105735853 () rs orientation: forward

Symbol	Name	Function Class
4930449E01Rik	RIKEN cDNA 4930449E01 gene	369 bp upstream
Gm62338	predicted gene, 62338	within coordinates
Rr497222	regulatory region 497222	within coordinates
Rr497223	regulatory region 497223	377 bp proximal
Rr497224	regulatory region 497224	789 bp proximal
Rr497225	regulatory region 497225	1123 bp proximal
Rr497226	regulatory region 497226	1432 bp proximal
Tssr127089	transcription start site region 127089	1399 bp upstream
Tssr127090	transcription start site region 127090	1580 bp upstream