rs32466806 SNP Detail

Summary

• ID
  rs32466806
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:105736295 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCGCTCCCCT AAGTGTGCAG
  TGCCTGCTCA CATACCATAG GTAGTACAGA GACCCTTCCC CCCCCCCTCC CCGGTAAGAC
  AGGAGATGGA GTGTGAACAG ATCCCCCACG TCTCTCCTGT GCGGGATGAC GAATGCTATA
  TCCTTTCCAG GCTGGTCTTC ACTCATCTGC TCTACCTACT GCTTTCTGCT TTGGGAATGC
  Y
  GAGTGACTTT ACCCTGTAGA ACCTGGGCCC ATCTGAAAGA GGAAGGGATG AAGGCCAGCT
  GGGTTGGCTG GCTGAATGAG TGTGTTGCAT GGATGGATCG TTGTTCACAT GCCTCAACAC
  TTTCTGCGAC TGGTCAGCTT GGTAGCATTC ATTCTAGCAG TGGTCAGTCT GCTCCTCTCC
  TTGAAGCAGA ATGGGAGAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49357222	NES12549796	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32466806					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49357222	NES12549796	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:105736295 () rs orientation: forward

Symbol	Name	Function Class
4930449E01Rik	RIKEN cDNA 4930449E01 gene	within coordinates
Gm62338	predicted gene, 62338	within coordinates
Rr497222	regulatory region 497222	66 bp distal
Rr497223	regulatory region 497223	within coordinates
Rr497224	regulatory region 497224	347 bp proximal
Rr497225	regulatory region 497225	681 bp proximal
Rr497226	regulatory region 497226	990 bp proximal
Tssr127089	transcription start site region 127089	957 bp upstream
Tssr127090	transcription start site region 127090	1138 bp upstream