rs32466110 SNP Detail

Summary

• ID
  rs32466110
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:43481547 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GGAATAAAGC AGGCGGTGAG TGGCTGGCAA GGCCTGTTGG ATAGAGGTTT TAAACATAAG
  TAGTGACAGC AAAGCTATGG CCAGGACTGG GGACAATTAA GAAGGTGGAA TGGGGGCTGC
  AGGGATGGCT TAGCGGTTGA GCACTGACTG CTCTTCCAGA GGTCCTGAGT TCAAATCCCA
  GCAACTACAT GGTGGCTCAC AACCATCTGT AATGGGATCC GATGCCCTCT TCTGGTGTGT
  CTGAAGACAG CTACAGTGTA CTCATGTAAA TAAATGAAGA AGAAGAAGAA GAAGAAGAAG
  R
  AGAAGGAAAA GGAGAAGGAG AAAGAGAAGG AGAAAGAGAA GGAGAAGGAG AAGGAGAAGG
  AGAAGGAGAA GGAGAAGGAG AAGGAGAAGG AGAAGGAGAA GGAGGAGAAG GAGAAGAAGG
  AGAAAGAAGA AGCTGGAATG GACCACTATG GGCAGAACTC ATGGGATGTG GGGGTATGGT
  TGTGTGTGGA AGCTGATGGA GGAGCTAGGC CAGATGGTAG GGGCACAGAT ACACAAGTAA
  TGAATAGAGT AGTTGAGGAC TGGTGAGTTT TCGACCCCAG TAGCAACGGG GTGGCTCTAA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45651694	mCV23402667	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs32466110					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:43481547 () rs orientation: forward

Symbol	Name	Function Class
Rr367607	regulatory region 367607	645 bp upstream
Rr590999	regulatory region 590999	1705 bp distal
Rr591001	regulatory region 591001	1859 bp distal
Rr591002	regulatory region 591002	1323 bp distal
Rr591003	regulatory region 591003	174 bp distal
Sit1	suppression inducing transmembrane adaptor 1	536 bp downstream
Tssr36968	transcription start site region 36968	724 bp upstream