rs32466015 SNP Detail

Summary

• ID
  rs32466015
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:105739169 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTTTACGA CAATCAAACG
  CGCAAAGCAC CTAAGGTCTC TCGGGCGCTG CAAACATCTC TTCCCCATCG TTCTCATCTT
  CACGGCAGTT ACACGTGTGT GTGCAGTTTT TCTTCATAAG AAAAAGGACT CTCAAAACGT
  CCCATACAAA TGTCCAATCA CTAATCCGTA GGACTGTATG GGACTTCTCC AAGATCGAAC
  K
  CTTGGAATTT TCTTAAACTC TCCGAGGAAC TGGATTCTCA ACGCGTCTCT TAATGGTTTA
  ATGCACTGTG CTCGCGGTGC CCGGAGCTGT CAGTGGTATC TTTTTTCCTG AGCTAGAGTT
  GGAGTTCAGG GTGCAGGCAA AACGCCATAT GCTGAGTTCA GAGCACTCCA AGACGTTCTG
  GGAGGTGCTG CTTTCGTGGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49357211	NES12549685	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32466015					SNP	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49357211	NES12549685	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:105739169 () rs orientation: forward

Symbol	Name	Function Class
4930449E01Rik	RIKEN cDNA 4930449E01 gene	within coordinates
Gm62338	predicted gene, 62338	1987 bp upstream
Gm62353	predicted gene, 62353	633 bp downstream
Rr497225	regulatory region 497225	1885 bp distal
Rr497226	regulatory region 497226	1505 bp distal
Rr497227	regulatory region 497227	within coordinates
Rr497228	regulatory region 497228	346 bp proximal
Tssr127089	transcription start site region 127089	1882 bp downstream
Tssr127090	transcription start site region 127090	1689 bp downstream