rs32466006 SNP Detail

Summary

• ID
  rs32466006
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:108475305 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAAT GCGAGGTCCT AAATGAGCAT
  S
  ACATACAAAA CATGCTCACA AGCAC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45651333	mCV22674994	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	G	C
ss147188577	ENSMUSSNP1374832	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		C
ss321252711	CHEV_4_108290713	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32466006					SNP	C	C	C	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:108475305 () rs orientation: forward

Symbol	Name	Function Class
Cc2d1b	coiled-coil and C2 domain containing 1B	1832 bp upstream
Cpgi14562	CpG island 14562	1233 bp proximal
Gm12743	predicted gene 12743	within coordinates
Rr597201	regulatory region 597201	216 bp proximal
Rr597202	regulatory region 597202	685 bp proximal
Rr597203	regulatory region 597203	1731 bp proximal
Rr597204	regulatory region 597204	1843 bp proximal
Tssr38307	transcription start site region 38307	1817 bp upstream
Tssr38308	transcription start site region 38308	1901 bp upstream