rs32465420 SNP Detail

Summary

• ID
  rs32465420
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:120527681 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACAAAACAA AACAAAACAA
  AACAAAACAA AACAAAACAA AACAAGAAAA GGACCAGAAA GACCGCTCAA TGGCTAAGAG
  TGCTTGCTTC TCTTTCTGAA GACCAGAGTT CCCAGCACCC ACATCAGGAG GCTCACAATT
  ACCTAACTCC AGCTCCAGAG GCTCCAGCAC CCTCTTCTGG CCTCACATGG TGCAGATACA
  Y
  GCAAACACAC ACGTGAAAAG TTGAAGTCAA TGCAGTGTTT AAGGAGGCTG CTCTAGCTAC
  CCAGCAGGGT CAGTATGACA GTGAGACAGC TGTAAGCTGG GTTCCCCAGG AAGCAGGCTC
  CAAGAAGATA TTCTATTCAC AGGAGATTGT TGTCTTCAGA GTCTACATTC ACAGAGGATA
  GGAGGAAGCC CAAAGGAACC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45651225	mCV24855052	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss147346075	ENSMUSSNP1933811	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs32465420					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:120527681 () rs orientation: forward

Symbol	Name	Function Class
Rr598841	regulatory region 598841	1732 bp distal
Rr598842	regulatory region 598842	473 bp distal
Rr598843	regulatory region 598843	16 bp distal