rs32464316 SNP Detail

Summary

• ID
  rs32464316
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:118445970 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ACCCCTAGCA CTGGGGTTTC GTACACAGAC CTTTGCGCCC AGCTGGGTGC TGGGATCCAA
  ACTCATGCCT GACTGATCCA TCTCCTTATT CCCCATCCCA CCCCAGTCAC GTATTTGAAA
  ATGAAGGCCC ACTTGCACTG GAGATCATTA CACTTGACAG ATATGACCTG GGCATGTGGT
  TTGCCAGTTT AATCTTATGA ATGCGTACTG CTTATCTTTA AAGTCCCTAG CCCTGGTTTC
  TGCTCTTACA CTGTAGGAAT GGTGGATCAC AGGACTGGCA CACAGGATGA TCATGGGGCA
  R
  AGAGACAGGC AGTGTGAGGG TGGAGGCCGT CAGGTGGCAG CAAGCAGGAC AGCTTGTTGT
  TGTGAATGGA GTTGTGAAGG GAGCTGTGAT AGTCTGTACC AAGGATGGGG ATAGCCAGAC
  CTTCCGAGGA CCTTCGATCC TGAGCCCTGA GTGCAGTCTG CCAAGGAATT CTGCGTTCCT
  CCTCATTCTC CCCACTTCTT ACCTTCTCTT CCATGTCTGT CTTAGTCACG AGCACCTCTT
  CAGCAAAGCC CACCTCCCTC TCTCGTTTGA TTCCCCGGCC ATCCTTATCA AAGACCTTCC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45650846	mCV24289229	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32464316					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:118445970 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cfap57	cilia and flagella associated protein 57			Intron
				Noncoding-Transcript-Variant
Rr598428	regulatory region 598428			804 bp proximal