rs32459716 SNP Detail

Summary

• ID
  rs32459716
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135707063 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTAA GTACACTGTA ACTGTCTTCA
  R
  ACACTCCAGA AGAGGGCATC AGATT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45650462	mCV22565842	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss147555206	ENSMUSSNP6016226	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
ss321353630	CHEV_4_135535667	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs32459716					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135707063 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm69125	predicted gene, 69125			within coordinates
Pithd1	PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1			Intron
				Noncoding-Transcript-Variant
Rr602230	regulatory region 602230			1784 bp proximal