rs32444169 SNP Detail

Summary

• ID
  rs32444169
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:147894258 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AAGGTGACAG GACCAGCTGC TCAATGTCCT AGGAGGGGCA ACTGCAGCTT AAGGGAGTTT
  TCAGGTTCCG CAAACACTGA ATTGTGAGAA TGGCGGCAGA AAATGCACCC CTGCTCCACA
  CGCCTGCCCA GTTCCTGCCT GTTCCCCAGT CCAACAGCTC CTCTGACCTG GAAGGTGACA
  GGACCAGCTG CTCAATGTCC TAGGAGGCCA GCACAACAAC TGCTGCTTAA GAAAGTTTTC
  AGGTTCCGCA AATACTAGGC GCTAGTCTCC CTCCATAACT TCCTGATCAC GAGGCAGCTG
  M
  GATGCAAGAA GAAAGATGAA ACCGCGGAAC TTCCCTTCAT GCTGCCTAGC CCCGCCTTCT
  GGACCCGCCC AATATTCAGC AGCTTCCTGC AATTCTTCTA AGCCTACCTA CTTCGGGACC
  TTTTAATTAA TTAGCTTCCC AATTCTTCAC AGCAATGTTT GGTGTTTTGA ATTTTTGCTT
  GCTTGCTTGC TTGCTCGTTC CTTTGCTTTT AATTTGTCTT TTTCTTAAAC TCATCTAATC
  AGGCTGGAGG CCCACCCTCC CCAGCAGGAA CCACTCCTCC AACTCTGTTG CAGGCTGCCT
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45648653	mCV24211637	ABI	CRAMUS_MOUSE	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32444169					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147894258 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm20707	predicted gene 20707			within coordinates
Rr377386	regulatory region 377386			within coordinates
Rr398847	regulatory region 398847			1756 bp upstream
Rr604501	regulatory region 604501			989 bp distal
Rr604502	regulatory region 604502			24 bp distal
Rr604503	regulatory region 604503			within coordinates
Tssr44548	transcription start site region 44548			1 bp downstream
Zfp984	zinc finger protein 984			Intron
				mRNA-UTR