rs32428592 SNP Detail

Summary

• ID
  rs32428592
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148144103 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGTGACTT TTTGGTACAG
  AAAAGAGAAA AACCCAAATT TCTACTTTAT TTTCTAAAAT GAGCACATTG CATTTTTCCA
  ATTAAAAAAA AATTGCTGTC TCCATATAGC TGTTTTTAAA TGCTTAGCGT AATTTATTTT
  TGTGTGCATG TGTGTGTGTG CGTGTGTGTA TGTGTGTGCG TGTGTATGTG TGTGTGCGCG
  Y
  GCACGTGCGT GTGCACACAC CTATGGAAGC CAGAACAGGC CATTGAGTCA ACAGATCACC
  CGGAGCTTGA GCTTCACAGG GTTGAAAGCC ACCAATGTGG ATGTGGGTGC TGGGAAACGA
  ACTCTGGTCC CTCTAGAAAG AGCAACCAGT TACCATGGAA CCATCTCTCC AGCTCCCAGA
  TGGTGCTGTA ACTGAATTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45646826	mCV23437529	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32428592					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148144103 () rs orientation: forward

Symbol	Name	Function Class
Gm13201	predicted gene 13201	within coordinates
Gm66468	predicted gene, 66468	within coordinates
Mthfr	methylenetetrahydrofolate reductase	95 bp downstream
Rr604567	regulatory region 604567	1898 bp distal
Rr604568	regulatory region 604568	231 bp distal
Rr604569	regulatory region 604569	577 bp proximal
Rr604570	regulatory region 604570	871 bp proximal
Rr604571	regulatory region 604571	1276 bp proximal