rs32427841 SNP Detail

Summary

• ID
  rs32427841
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149392932 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATGC CCCTAGAGGG GGTTACCAGG
  R
  CTCATAAGAA CACAAAAGCT CTATG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45647159	mCV24953920	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	A
ss148031070	ENSMUSSNP341373	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		A
ss321425364	CHEV_4_148682584	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32427841					SNP	A	G	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149392932 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15323	CpG island 15323	33 bp distal
Kif1b	kinesin family member 1B	782 bp upstream
Rr398866	regulatory region 398866	499 bp downstream
Rr604876	regulatory region 604876	980 bp distal
Rr604877	regulatory region 604877	1145 bp distal
Rr604878	regulatory region 604878	293 bp distal
Rr604879	regulatory region 604879	546 bp distal
Rr604880	regulatory region 604880	1119 bp proximal
Tssr44642	transcription start site region 44642	772 bp upstream
Tssr44643	transcription start site region 44643	737 bp upstream