rs32426085 SNP Detail

Summary

• ID
  rs32426085
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:45086681 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGCTATCA TCCTTTTCGG
  CTGCCTGCGG GTCTCAGCTC TCTTCCTACC TTACGGGGGG TCTTCAATGA TGAGCTTGTT
  GAGAACCAAA CCAGGTATTT TGTTATGGAA GTTGAAACTC TAGATCGGTT CTGTCTTCCC
  ACTTAACTCT AATTGTACAA ATAAACATTC CCTGTGCAGA ACTGAGGCCT ACATGTTATG
  Y
  AACAGCTCCA AAGCAACACC AGCAGCTTGA CTAGAGCATC ATTGGGTACC CTGAAAGCTG
  TGAGCTTGCA TCCCTCCAGT GGGATCCAAT GGTCAGCAAA TAGTGGTGTT CCAGTTACCT
  GGCATCCTAG CCTGATTCTC TAGATTTCCT GGTGATCCTC AAATTCCCTT TATATTTCTG
  TCTTAGTTAG GGTTTTACTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45646786	mCV25148470	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss146249783	ENSMUSSNP1606747	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32426085					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:45086681 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14228	CpG island 14228	1681 bp distal
Rr591311	regulatory region 591311	1587 bp distal
Rr591312	regulatory region 591312	1374 bp distal