rs32424537 SNP Detail

Summary

• ID
  rs32424537
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:151849248 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAATCAGCC CAAGGGACAG
  CAAACTCACT GACAGCCAGT TACATGCAGT CCTGTCAGAC ACCTTGGTTC ACTGAAGGTC
  ACAGTGCTGC ATGTGGTCTG ACCACGCTCA GAGCTCCTGA CTGCCTTCAT CTGAACCTAA
  CCCACAGCCC ATCTCACTTG GAAGCATGCC TGCATCAAAC TGCAACCACT CCCCCTCAAG
  Y
  CTCCCAGAAA GGTGGGAGGT TGTGGGGCAG GACAGAGAGG GGCACTGAGG AGGGCAGCTG
  CTGAGGCAGC AATTTCATCT GTCCAGTCTC CTTACAGTAG AGTTCCTTGA GGTCAGGGAC
  TGCGTCCCAC CATCCATCCC TGAGCCCAGA AGTCTGGCGA CTCAGCAGAT AGCAAGTGTT
  GACACTGCCG CCTGGCTCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45646166	mCV24231398	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	C
ss148077039	ENSMUSSNP905090	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32424537					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151849248 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Camta1	calmodulin binding transcription activator 1			Intron
				Noncoding-Transcript-Variant
Rr605638	regulatory region 605638			432 bp distal
Rr605639	regulatory region 605639			717 bp proximal