rs32418804 SNP Detail

Summary

• ID
  rs32418804
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:17977945 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTCTGTCC CTCCACACAC
  TTATCTCCCT CCTGCTCTCC CTCTCTGGGG AAAGGATACT CCTTACCACT GAAGTCACTC
  TATCAGATCG ATTTTATCTA GATCATTTTA GGCAATGGAT TTGTAGGTCA CACAGAATCT
  GATATGGGTT GATAGTGCTA TTTTTAACCA TCACTATCAT TTGTGTGTGT GTGTTCCCGG
  Y
  TCCCTGGAGA TTTGTGTATT GGAATCTTAA TTTCTCAGTG TTGGAGTGGC CAGAGTTGAA
  GAATGTTGAA TGGAGGAGCC TATGGGGAGG TATTGAGGGC ATGAGAGCAG AGGCATTCTA
  ACTGGAGTGA TGCCATCTGG TGGATTGAGT GAGTTTTCAC CAACAGTGGA TGAGTTGCCT
  AGACTGTGGG CTCTTAAAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
ss46143315	mCV25039232	ABI	CRAMUS_MOUSE	f	SNP		C	T				T
ss51883296	NES14902309	PERLEGEN	MM_PANEL2	f	SNP	C		T	T	C	C		C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
rs32418804					SNP	C	C	T	T	C	C	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51883296	NES14902309	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:17977945 () rs orientation: forward

Symbol	Name	Function Class
Mill1	MHC I like leukocyte 1	1327 bp upstream
Rr642879	regulatory region 642879	127 bp proximal
Tssr64734	transcription start site region 64734	1182 bp upstream
Tssr64735	transcription start site region 64735	1215 bp upstream
Tssr64736	transcription start site region 64736	1365 bp upstream