rs32416319 SNP Detail

Summary

• ID
  rs32416319
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:127310397 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGAAGTAA AATCTCTGCT
  TGTCACACCT GCGTGACCGT GGGCAAGTCA TTTGTCTCAT TGCCTCCTCT ATTATGGAAT
  GAGTTAATGT GTATATACAA GCATTCAGGA TAGTGCTTGG CACACATGAA TACCCAATAC
  ATACTGCTGG TTAGTGTGTG TGTGTGGCCA CTGCTGACAT TGTGGCCTCA CCATTCACCT
  R
  TGGTGTGCTC TGCCAGTGAA CTTTGTTCTG ACAGTCTGCT TGTGTTAACC CTCTCACGCA
  GGCTTTTCCA GTTTCCTTTC TCACAAGCTC CACTCAAGTG GAAACTTCTG GTTTGGAAAG
  TCAGTTATAT CAAATGATAG TTTGCTGGGG CACACAGGTG AAAGGATGTC TTGTTAAGCA
  GACACATGAA AGAATGTTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46143290	mCV24290406	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A	A
ss145882031	ENSMUSSNP1453007	ENSEMBL	ENSEMBL_Sanger	f	SNP			G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32416319					SNP	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:127310397 () rs orientation: forward

Symbol	Name	Function Class
Ctf1	cardiotrophin 1	1511 bp upstream
Rr655876	regulatory region 655876	1802 bp distal
Rr655878	regulatory region 655878	within coordinates
Rr655879	regulatory region 655879	1021 bp proximal
Rr655880	regulatory region 655880	1730 bp proximal
Tssr69270	transcription start site region 69270	1484 bp upstream