rs32403755 SNP Detail

Summary

• ID
  rs32403755
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:119825723 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGAT CGAGTCACAT GACTGGCCAG
  K
  GCCACCCTCT GTGGAAGCCC CTTCT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45643478	mCV24263186	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	G	G
ss147339679	ENSMUSSNP1478533	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32403755					SNP	T	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:119825723 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Hivep3	human immunodeficiency virus type I enhancer binding protein 3			Intron
				Noncoding-Transcript-Variant
Rr598695	regulatory region 598695			1263 bp distal
Rr598696	regulatory region 598696			within coordinates
Rr598697	regulatory region 598697			492 bp proximal
Rr598698	regulatory region 598698			1275 bp proximal
Tssr43141	transcription start site region 43141			1683 bp upstream
Tssr43142	transcription start site region 43142			1634 bp upstream