rs32403404 SNP Detail

Summary

• ID
  rs32403404
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:123048742 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTTGTTTG GTTTTTAAGG
  ACAGAGTTTG TCTATGTAGC CCCAGCTCTC ATGGAACTAG TTCTGTAGAA CAAATTGGCC
  TCTGACTCAG ATATCCGACT GCTTCTGCCT CCCAAGTGCT GGGATTAAAG GTGTGTGCCA
  CCGTATCCTG AAACACACCC TTTTTTTCCT TTTGTTTTGT TTTGTTTTTG TTTTTTAAAA
  Y
  TTGGCTTCTA GGGAGTGAAC TCAGGACCTG TGCTTTCAGG ACAGGATTTT ACTACCTGAC
  CAATATTCCT AGGCCTCTAA CTCTTATTAA TCCCCACGAA GAAGCACGGA CTTTCCATTC
  AAAGAACGCA GAGACTCCGG TGACTAATTA TCAACTAAGG GACTGTTTAA CTTGCAGAAA
  CTGCTGGCTT TTGGGCTGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45643800	mCV22631438	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss147362150	ENSMUSSNP5527455	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
ss321289761	CHEV_4_122832192	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32403404					SNP	C	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:123048742 () rs orientation: forward

Symbol	Name	Function Class
Rr599058	regulatory region 599058	136 bp proximal
Rr599059	regulatory region 599059	247 bp proximal
Rr599060	regulatory region 599060	511 bp proximal