rs32390235 SNP Detail

Summary

• ID
  rs32390235
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:132647899 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCACTCCAG AGGCAGAGGC AGGGGGATTT CTGAGTTCGA
  GGCCAGCCTG GTCTACAAAG TGAGTTCCAG GACAACCAGG GCTATACAGA GAAACCCTGT
  M
  TCAAAAACCA AAAAAGAAAA CAAACAAACA AAAAAAGAAA GCTAGCCTGG ACTACCATCT
  CAAAAACAAA ACAAAACAAC TATAAACAAA AGAACAAGA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45642727	mCV24820317	ABI	CRAMUS_MOUSE	f	SNP	A	C	A	C
ss147479309	ENSMUSSNP4632716	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32390235					SNP	A	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132647899 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14977	CpG island 14977	1394 bp proximal
Fam76a	family with sequence similarity 76, member A	Intron
Gm69717	predicted gene, 69717	within coordinates
Rr601111	regulatory region 601111	1037 bp proximal
Rr601112	regulatory region 601112	1895 bp proximal
Rr601113	regulatory region 601113	1914 bp proximal
Tssr43726	transcription start site region 43726	555 bp downstream
Tssr43727	transcription start site region 43727	1899 bp downstream
Tssr43728	transcription start site region 43728	1959 bp downstream