rs32388590 SNP Detail

Summary

• ID
  rs32388590
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:147891808 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GAGCCCAACT CCACCCCTTG TTCAATACCT CTAACATACC TGGATCCTTT GTGAGAGTCT
  CCTTGACCTT TACCCTTCCA GGGCTCTTAG TGTTGATTTA CAGTTATGCA CATTTTGCTG
  AGCATATGAA TACCTGAAAA TGGGAAAATA TTATTCAGAA TGAATCTGGA ACTTTTCATG
  GAACACAAAT GAGAAATGTC AATACCTGAT AAAAATATAA ACATGAGGGA AAGAGAAGAT
  ATTATGAAAA ACTCAACAGA CCATGAATGT GCATTGGCTT TTCATGAAGC AAGGAGTCAT
  W
  TTTCTTATGT AAGTGAGCAA CCATAATCAT TCCAAAGGTG CTGTCTAATT TTGTCTTAAT
  CCATAGTAAG TTTTCCACTT ATTAAAATAT CTTTGGGGGC TGGTGAGATG GCTCAGTGGG
  TAAGAGCACC CGACTGTTCT TCCGAAGGTC CAGGGTTCAA ATCCCAGCAA CCACATGGTG
  GCTCACAACC ATCCGTAACA AGATCTGACT CCCTCTTCTG GTGTGTCTGA AGATAGCTAC
  AGTGTACTTA CTATAATAAG AAATAAAGTC TTTAAAAAAT AATAATAAAA TAAAATCAAA
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss45642512	mCV24211600	ABI	CRAMUS_MOUSE	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs32388590					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147891808 () rs orientation: forward

Symbol	Name	Function Class
Gm20707	predicted gene 20707	within coordinates
Rr377386	regulatory region 377386	366 bp upstream
Rr604501	regulatory region 604501	1137 bp proximal
Rr604502	regulatory region 604502	1821 bp proximal
Zfp984	zinc finger protein 984	Intron