rs32381690 SNP Detail

Summary

• ID
  rs32381690
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148914860 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTTT CTTTTCTGGA ACTCAGTCTG
  R
  GAAGATTGTC CTATGGCCTG TGTAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45641795	mCV22996962	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss148020521	ENSMUSSNP4965481	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss321423187	CHEV_4_148204512	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32381690					SNP	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148914860 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Casz1	castor zinc finger 1			Intron
				Noncoding-Transcript-Variant
Rr377397	regulatory region 377397			within coordinates
Rr604769	regulatory region 604769			within coordinates