rs32380119 SNP Detail

Summary

• ID
  rs32380119
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:4464915 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGTTACTTTC TGGTAAGTTA AGGCTCAACA GAGTCTTACA
  ATAGCAATAA GAGACAAAAC ATTTCATTCT TGAAGATGGG GCACTGGCAG AGAAAACCAG
  K
  CAGCATAGAC CAAACACTTA CAGAAACATG GTTCTACCAG ATGGATAAGC TTAGAGATCC
  AGTGACAGAG TTCAATGACT ACAGATAATA CATTGTTCA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss45641107	mCV27569873	ABI	CRAMUS_MOUSE	f	SNP	T	G	G
ss145948754	ENSMUSSNP3103811	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs32380119					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:4464915 () rs orientation: forward

Symbol	Name	Function Class
Rr588287	regulatory region 588287	153 bp distal
Tssr40838	transcription start site region 40838	786 bp upstream