rs32379979 SNP Detail

Summary

• ID
  rs32379979
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:4463544 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTTTCTCA GGTAACCCGG
  TTTTTTACAA CTGAAACATG TAATTCCATA AGTATTTCTG ACATAGGTGC CGAATTTCTC
  CCCTTTCATT GCTGCAGAGT AAACTATCCC CTGAATTACT GCTAGTGAGG CATCTTTCGA
  TTCTGATTGC CCCATGATAA AACTTACTCG TCCTTAACTG ATCTATCTAC CCATCAGCCC
  R
  TCTGCAGCAC AGTTACGACA AGCCTGCCTC AGCTGAGCAT GACTTAATGA CATCTCTAAT
  AAGACCCCAA TAACTAAAAA GTCTGAGTCA GCACTGCATC TGGTCCTTCT TTATTTACAA
  GATCATTAAG ATCACGTCCT ACCTTTTCCC ATTTAAGGTG ATGAATCTCT GGTCCATTTA
  TTATGAACCA TAAACAGACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45641396	mCV27569909	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A
ss145948725	ENSMUSSNP6311873	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs32379979					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:4463544 () rs orientation: forward

Symbol	Name	Function Class
Rr588287	regulatory region 588287	622 bp proximal
Tssr40838	transcription start site region 40838	582 bp downstream