rs32371675 SNP Detail

Summary

• ID
  rs32371675
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150132389 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAGG ACGGAGACAT AGAGCCTGTG
  K
  CACAATGGAG CCGAGGGCAG TTTGT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45640140	mCV23448182	ABI	CRAMUS_MOUSE	f	SNP	G	G					G
ss46710996	NES11008633	PERLEGEN	MM_PANEL2	f	SNP			T	G	G	T	G	T		G	T	G	T		T
ss148045846	ENSMUSSNP6838894	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G					G
ss321427739	CHEV_4_149422041	CHEVERUD	SCREENING_POP	f	SNP									T					G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32371675					SNP	G	G	T	G	G	T	G	T	T	G	T	G	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46710996	NES11008633	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150132389 () rs orientation: forward

Symbol	Name	Function Class
Gm13067	predicted gene 13067	263 bp upstream
Gm69230	predicted gene, 69230	within coordinates
Rr377414	regulatory region 377414	397 bp upstream
Rr605155	regulatory region 605155	within coordinates
Rr605156	regulatory region 605156	582 bp proximal
Rr605157	regulatory region 605157	1171 bp proximal
Tssr40363	transcription start site region 40363	259 bp upstream
Tssr40364	transcription start site region 40364	346 bp upstream
Tssr40365	transcription start site region 40365	1241 bp upstream