rs32365472 SNP Detail

Summary

• ID
  rs32365472
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:151851235 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGAGGAATG GAGCAGGAGG
  ACAGTGCCCT GAATGAAAGG GACAATGGAC ATCAGAAAAA AAAAATGTTC AGGCACTCCA
  GAACACAGAG GCAGAAACCA GACCATGGAT TGGTAACTGA GAGTTTCAAG CAGAGCCAGT
  AGTGGCACAC TGCCTGCAAG TGCAGCCCTT GCAGCTCAGG CAGAGGAAGG CTAAGTGTGA
  R
  GCCAACCTGC CAGATAGAAT TAAACCTTGT CCAAAAAAAA AAAAAAGTTG TCAGTGAATC
  CCCAAAGAAA GACCTACTCA GTGTGGCAGG GAGGCAGACA CAGCATAAAC AGTAGTGCAA
  TCTGGGTGAA ATTTCACTTG AGACAGAACA AGTCTGAGCA GAGGTGGTGA GCAGTGGTCA
  GCTCTGTCTA GACAAGCGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45638776	mCV24231421	ABI	CRAMUS_MOUSE	f	SNP	A		G	G	G
ss148077062	ENSMUSSNP5559794	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32365472					SNP	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151851235 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Camta1	calmodulin binding transcription activator 1			Intron
				Noncoding-Transcript-Variant
Rr605639	regulatory region 605639			1041 bp distal
Rr605640	regulatory region 605640			654 bp proximal
Rr605641	regulatory region 605641			1075 bp proximal