rs32359403 SNP Detail

Summary

• ID
  rs32359403
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:48634582 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTTTAAA CTTTGGTTTT
  ATTTATTTGA ACTATGCTGT ATGCACTGTC CTAGCTTGCC TTCTGTGGCT GTGATAAACA
  CTACAATCGA AAGCACCTTG GGGAAAAAAA GTTTATTTGG CTTACATGTC CTTAACACAG
  CCCGTCATTC AGGGAAGTTG TGGTGTGAGC TGAAACAGAG ACCATGAAGA AATGTGCTCA
  Y
  TGGCTTACTC CCCAGGGTTT GCCCGGCCTG CTTTTTCAGA CACCCCAGGC CGGCCTGCTC
  ATGGGTGGCA CTGCCCACAG CTGCCTACTT AGGCTTTCTC TGAACCCTCT CACGTCAATC
  ATGAATCAAG AAGATGCTCC AGAGCCGGGC AGTGGTGGCA CATGCCTTTA ATATCAGCAC
  TTGGGAGGCA GAGGCAGGCG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45638998	mCV23193876	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss146279077	ENSMUSSNP3884398	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32359403					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:48634582 () rs orientation: forward

Symbol	Name	Function Class
Rr592000	regulatory region 592000	578 bp distal
Rr592001	regulatory region 592001	724 bp distal
Rr592002	regulatory region 592002	241 bp distal
Rr592003	regulatory region 592003	324 bp distal
Tmeff1	transmembrane protein with EGF-like and two follistatin-like domains 1	Intron