rs32357038 SNP Detail

Summary

• ID
  rs32357038
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150063544 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAGTGGACT CACAGGCCTA
  CCCAAGGAAC CTGACTCAGC CATGTGAGCC CTTCATGGGT CCCCTGGAAA GGAACAGGCC
  CCACAGGGTG CTGGCATGGC TTCTAGAATC TAACATACAG TTTCTGGACA ACACTGGACA
  TTTTCCCAGT TTCAAATCTT CAGTCACTAA GGCCCTGCCA CGTGGCACAC TGGGCTATTG
  R
  CAGGACAAGG TGTGCCTGTG CATAGCATTT AGCATCTGCC CATCAGTGGG GAGACCACAG
  AGCCACCAGG CAAGGTGCAG ACTTTTGCTT CCATTGTTTC AACAGGGAGT GAGCAGGGTG
  CAGTTAGAAG ATCCCAGGCG GGGTCAGAGC CAGCCCAGGG TTACGGCCTG CAGGCCAGTG
  CTAAGCCACA GCTACAGGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45638301	mCV24959949	ABI	CRAMUS_MOUSE	f	SNP	A	A	G					G		G
ss46710240	NES11013426	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	G	G		A	G	G	G	G	G	G	G	G
ss148044553	ENSMUSSNP7072065	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32357038					SNP	A	A	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46710240	NES11013426	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150063544 () rs orientation: forward

Symbol	Name	Function Class
H6pd	hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	388 bp downstream
Rr398875	regulatory region 398875	920 bp upstream
Rr605129	regulatory region 605129	556 bp distal
Rr605130	regulatory region 605130	within coordinates
Rr605131	regulatory region 605131	586 bp proximal
Tssr44704	transcription start site region 44704	1852 bp downstream