CCCAG GGTCTGGTGG ATGATGTAAG R GCCAGGGAAG TTGGTTGTGT TTGTG R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C57BL/6J |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss45638107 | mCV22981062 | ABI | CRAMUS_MOUSE | f | SNP | G | A | G | ||||||||||
ss46711203 | NES11008238 | PERLEGEN | MM_PANEL2 | f | SNP | G | G | G | G | G | A | A | G | A | A | |||
ss321427880 | CHEV_4_149434552 | CHEVERUD | SCREENING_POP | f | SNP | A | G | |||||||||||
SNP Consensus Information | ||||||||||||||||||
SNP | Consensus Type | A/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C57BL/6J |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
||||
rs32351496 | SNP | G | G | G | A | G | G | A | A | A | G | A | G | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss46711203 | NES11008238 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr4:150144900 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm13067 | predicted gene 13067 | within coordinates | ||||||
Rr398877 | regulatory region 398877 | 244 bp downstream | ||||||
Rr605161 | regulatory region 605161 | within coordinates | ||||||
Rr605162 | regulatory region 605162 | 954 bp proximal | ||||||
Rr605163 | regulatory region 605163 | 1441 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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