rs32345661 SNP Detail

Summary

• ID
  rs32345661
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141408868 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATGTGATGT TCCTCAACGC
  CTTCTGTTCT AGAATTGTTC AGTTTAAGCC AATCAATTCC TAACGAATCC CTAACTTCAT
  CCAAACTTCA GACAAAAGAT TGTTTTTTTT TTTTTAAATG TACTTTTTAA GACAGGGTGT
  CACTAATGTA GCTGGCCTTG ACCTCAAATA TCACTTGCCT CCTAGAATGA ACGGTATGTC
  W
  GCTTGCCTGG ACTTTTGATT TTATTTATTA TTCACAGATC TTAAAAATCA AAAGCAACTA
  TTTGTTGCAA AGAAAATAAC AACCAAAAGA ACAAAGTATT TGGCAAGTGA GTCCAACTTA
  TTCAAAGTAC TCCTAAGAGC AACACCTGTA TAATCACTGA TTTATCAAAC TGCTTCTAAA
  AATAGCATAC AAGTACATAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45637204	mCV24075761	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	A
ss147741821	ENSMUSSNP2898027	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs32345661					SNP	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141408868 () rs orientation: forward

Symbol	Name	Function Class
Rr377311	regulatory region 377311	1285 bp downstream
Rr603858	regulatory region 603858	236 bp proximal