rs32344406 SNP Detail

Summary

• ID
  rs32344406
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148171160 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTT CAGCGGAGGA CGGAGACTAA
  K
  AAAAACAAGC AACACAGGTT GGGGA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45637287	mCV24935109	ABI	CRAMUS_MOUSE	f	SNP	T	G	T
ss147991923	ENSMUSSNP6236606	ENSEMBL	ENSEMBL_Sanger	f	SNP			T
ss321416956	CHEV_4_147460812	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs32344406					SNP	T	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148171160 () rs orientation: forward

Symbol	Name	Function Class
Agtrap	angiotensin II, type I receptor-associated protein	Intron
Rr377389	regulatory region 377389	763 bp downstream
Rr377390	regulatory region 377390	850 bp upstream
Rr604582	regulatory region 604582	345 bp distal
Rr604583	regulatory region 604583	287 bp proximal
Rr604584	regulatory region 604584	1318 bp proximal
Tssr40250	transcription start site region 40250	827 bp downstream
Tssr44579	transcription start site region 44579	1258 bp downstream
Tssr44580	transcription start site region 44580	1333 bp downstream
Tssr44581	transcription start site region 44581	1355 bp downstream