rs32343982 SNP Detail

Summary

• ID
  rs32343982
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148995757 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGAGAAGTAG GAGAACCATG GTCACTGCCA CTGTCCCTAA
  AAGCCAGGAG ACAGACACAG TAGGGAGCAT CCTTGCCAGA GGGAAGGCTT CCCTGAGGAC
  Y
  GATCCACATG GCAATGTTGA GGGGAAATTA CAAAGTGTAG ATCCCTGGAT GTTGACTGTG
  TTATTCAGCT TGTGTCCCTG AAGGGCTCCG GATCCCAGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45636641	mCV22565466	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss148022824	ENSMUSSNP6993463	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss321423688	CHEV_4_148285409	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs32343982					SNP	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148995757 () rs orientation: forward

Symbol	Name	Function Class
Casz1	castor zinc finger 1	Intron
Rr377399	regulatory region 377399	1046 bp upstream
Rr604794	regulatory region 604794	1831 bp distal
Rr604796	regulatory region 604796	1720 bp proximal