rs32343001 SNP Detail

Summary

• ID
  rs32343001
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:84585760 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCAGGGGGT ACATGAGTCC
  AGGGGTGTGA CTGAAGACTA TCTGCGCCTC GAGACACTGA TTCAGAAGGT GGTGTCGCCG
  TACCTGGGCA CCTATGGTCT CTATTCCAAT GAAGGACCTT GTACCCATTC CTGTATCCTC
  GGTAGGTATT GACTAGGGCT GGGGCCACAG TGTTGGCAAA ACCAGGATCC CACAGGGGAC
  Y
  AACTACAGTC ACACAGAATG TCTGTTCCCT GCACCTGTCT AGCCTTGCTG TGTGTAGATG
  TGGACCTTCA GGGTAGACGG GGTATTGGAG GGTATCGGGC AACTCCCAGA ACAGTGATGG
  CTCTCCACAG AGACCCGCCA TGCGAAGAGC CTCCATCATC CCTGTGCTAG CTCAGAAAGG
  AATACAGAGA AAGTAGGCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39391315	mCV24773976	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss148254515	ENSMUSSNP4739607	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
ss325039411	CHEV_15_84531989	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32343001					SNP	C	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:84585760 () rs orientation: forward

Symbol	Name	Function Class
Prr5	proline rich 5 (renal)	Intron
Rr404546	regulatory region 404546	482 bp upstream
Rr507026	regulatory region 507026	808 bp distal
Rr507027	regulatory region 507027	955 bp distal
Rr507028	regulatory region 507028	347 bp proximal
Rr507029	regulatory region 507029	609 bp proximal