rs32342920 SNP Detail

Summary

• ID
  rs32342920
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148942092 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTGCAACAT GCAGCTGAGG GGAACAGTTT TGACTAATGG
  AGCTAAGAGT CCTCTTGTGG CAGCCCAAGG AACCCCAATC CTTACAGCCA GGTAACTCCC
  R
  CAAGCATCTT TCTTCCCGGT ATGGGAATCA CACTGGAACT TCAGGGCGTG CAGTCCAGAG
  TCCCAGCATC CTGTATGTGG ATTGTGATGC TGGCCAGCT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45636724	mCV22997266	ABI	CRAMUS_MOUSE	f	SNP		G	G	A
ss148021593	ENSMUSSNP6000245	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		A
ss321423413	CHEV_4_148231744	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32342920					SNP	A	G	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148942092 () rs orientation: forward

Symbol	Name	Function Class
Casz1	castor zinc finger 1	Intron
Rr1824	regulatory region 1824	1836 bp upstream
Rr407036	regulatory region 407036	within coordinates
Rr604775	regulatory region 604775	95 bp proximal
Rr604776	regulatory region 604776	1614 bp proximal